GST Filing Cost for Small Business India 2026
Blog/GST & Compliance

How Much Does GST Filing Cost for Small Business?

Srinivas Maram
August 29, 2026
9 min read
Updated: October 6, 2026
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Quick Answer

GST filing cost for small business in 2026: free on the GST portal, ICAI's recommended CA fee scale, and managed filing from Rs 1,500 a month.

Want a qualified CA to handle this for you? Talk to Tax Garden, Hyderabad.

GST filing cost for a small business: quick answer

  • Filing yourself on the GST portal: Rs 0. gst.gov.in charges nothing to file GSTR-1, GSTR-3B or GSTR-9.
  • Managed filing (Tax Garden): Rs 1,500 a month for GSTR-1 and GSTR-3B up to 100 transactions, Rs 3,000 up to 225 and Rs 5,000 up to 500.
  • Chartered accountant: fees are set by each firm. ICAI's recommended minimum scale (February 2020) for GST challans and returns is Rs 15,000 and above plus Rs 4,000 a month in Class A cities.
  • GST software: subscription prices differ by vendor and plan, and you still do the filing work.
  • Filing late: Rs 50 a day in late fee plus 18% interest, which often costs more than the filing fee.

The government does not charge a small business anything to file a GST return. What you pay for is the work around the return: preparing sales data, reconciling purchases against GSTR-2B, tracking due dates and fixing errors. This guide sets out what each route costs, what a quote usually leaves out, and how the cost of a late return compares with the cost of getting it filed.

The Four Ways to Get GST Returns Filed

RouteWhat you payWho does the workSuits
GST portal, on your ownNothingYouNil filers and owners with few invoices and time to reconcile
GST or accounting softwareVendor subscriptionYou or your accountantBusinesses with an in-house accountant
Chartered accountant or tax practitionerMonthly or per-return fee quoted by the firmThe firmBusinesses that also want advice and representation
Managed filing serviceFixed monthly fee by transaction volumeThe service providerOwners who want returns filed without running software

1. Filing on the GST Portal Yourself

Filing on gst.gov.in is free, and a nil GSTR-1 or GSTR-3B can also be filed by SMS to 14409. The real cost is time. Each month someone has to prepare invoice-wise sales for GSTR-1, match purchase invoices against GSTR-2B, act on entries in the Invoice Management System and compute the tax in GSTR-3B. Our nil GST return filing guide covers the zero-transaction case, which is the easiest one to handle yourself.

2. GST Software

Software prepares the return from your books and can cut data entry, but it does not decide which input tax credit is eligible or reply to a notice. Vendors change prices and plans often, so we do not list them here; check each vendor's website. If you are weighing software against a filing service, see our comparison of ClearTax alternatives for GST and ITR filing.

3. Chartered Accountant

There is no fixed market rate. Each firm quotes on your invoice volume, number of GSTINs and the scope you ask for. The only published benchmark is the Revised Minimum Recommended Scale of Fees issued by ICAI's Committee for Members in Practice in February 2020:

City classRecommended minimum for GST challans and returns
Class ARs 15,000 and above, plus Rs 4,000 per month
Class BRs 10,000 and above, plus Rs 3,000 per month
Class CRs 8,000 and above, plus Rs 2,000 per month

The scale is recommendatory. ICAI states that members are free to charge varying rates depending on the nature and complexity of the assignment, so real quotes for a small business are frequently different. Use the scale as a reference point, not as a price list.

4. Managed GST Filing Service

A managed service takes your sales and purchase data and does the reconciliation and filing for you. Tax Garden's GST filing services are priced by monthly transaction volume:

Tax Garden servicePrice
GSTR-1 and GSTR-3B filing, under 100 transactionsRs 1,500 per month
GSTR-1 and GSTR-3B filing, under 225 transactionsRs 3,000 per month
GSTR-1 and GSTR-3B filing, under 500 transactionsRs 5,000 per month
GSTR-1 and GSTR-3B filing, above 500 transactionsRs 5,000 to Rs 11,000 per month, quoted on volume
Retail Shops GST Package (GSTR-1 and GSTR-3B up to 100 transactions, plus TDS filings)Rs 2,100 per month
GSTR-9 annual return (turnover Rs 2 crore to Rs 5 crore)Rs 7,000
GSTR-9C reconciliation statement (turnover Rs 5 crore to Rs 10 crore)Rs 14,000
GST notice replyRs 3,500 per reply
GST registrationRs 1,100 (auto approval) or Rs 1,800 (regular)

These are the prices published on our pricing page as of October 2026. On the smallest tier, a year of monthly GSTR-1 and GSTR-3B filing comes to Rs 18,000 (Rs 1,500 x 12).

What Decides Your GST Filing Cost

  1. Transaction volume. More invoices mean more data to prepare and more purchase entries to reconcile. Most quotes, including ours, scale with it.
  2. Number of GSTINs. Each state registration files its own GSTR-1, GSTR-3B and annual return.
  3. Monthly or quarterly filing. With turnover up to Rs 5 crore you can opt for the QRMP scheme and file GSTR-1 and GSTR-3B quarterly while paying tax monthly through PMT-06. See the QRMP scheme guide.
  4. Scheme. Composition taxpayers do not file GSTR-1 or GSTR-3B. They pay tax through CMP-08 each quarter and file GSTR-4 once a year.
  5. Annual return. GSTR-9 is required only when aggregate turnover exceeds Rs 2 crore, and the GSTR-9C reconciliation statement when it exceeds Rs 5 crore. Below Rs 2 crore there is no annual return cost.
  6. Condition of your records. Clean sales and purchase registers take less time than bank statements and loose bills.

What a Monthly Quote Often Leaves Out

Ask for the scope in writing before comparing two prices. Items that are commonly charged separately:

  • Reconciliation of purchases with GSTR-2B and action on IMS entries
  • The annual GSTR-9 and GSTR-9C
  • Amendments to earlier returns and GSTR-1A corrections
  • Filing of missed returns for earlier months
  • Replies to notices such as ASMT-10, DRC-01B and DRC-01C
  • Refund applications and LUT filing for exporters

A lower monthly fee that excludes reconciliation can turn out to be the more expensive quote once these are added.

What a Late Return Costs

The filing fee is small next to the cost of missing a due date. Under Section 47 of the CGST Act, read with Notifications 19/2021 and 20/2021-Central Tax, the late fee for GSTR-3B and GSTR-1 is:

ReturnLate fee per dayMaximum per return
Nil returnRs 20 (Rs 10 CGST + Rs 10 SGST)Rs 500
Return with tax, turnover up to Rs 1.5 croreRs 50 (Rs 25 + Rs 25)Rs 2,000
Return with tax, turnover Rs 1.5 crore to Rs 5 croreRs 50Rs 5,000
Return with tax, turnover above Rs 5 croreRs 50Rs 10,000

Interest at 18% a year under Section 50 runs on the tax paid late.

Example. A trader with turnover under Rs 1.5 crore files one GSTR-3B 30 days late, with Rs 40,000 of tax paid in cash.

ItemWorkingAmount
Late fee30 days x Rs 50 (below the Rs 2,000 cap)Rs 1,500
InterestRs 40,000 x 18% x 30/365Rs 592
Cost of one late returnRs 2,092

That is more than a month of managed filing on the Rs 1,500 tier, and a late GSTR-1 for the same month carries its own late fee. Returns also cannot be filed at all once three years have passed from the due date. The full rules are in our GST late fee and interest guide.

Which Route Fits Your Business

Your situationRoute that usually fits
Nil returns or only a few invoices a month, and time to fileGST portal on your own
An accountant on staff who already keeps the booksAccounting or GST software
You need tax advice, audits and representation along with filingChartered accountant
Regular monthly invoices, nobody to reconcile, and you want a fixed feeManaged filing service

Whichever route you pick, compare quotes on the same scope: returns covered, reconciliation, annual return, notices and the number of GSTINs.

Get a Fixed Quote for Your GST Filing

Tax Garden files GSTR-1, GSTR-3B and annual returns with a dedicated account manager, and Kavach error protection covers up to Rs 50,000 in service charges if our team makes a clerical error. See the scope of our GST return filing service, compare plans and pricing, or use the GST compliance checklist for new businesses to see what your first year involves. For how that compares with ClearTax, ExpressGST and Ankpal, see the best GST filing service comparison.

Frequently Asked Questions

Can a small business file GST returns for free?

Yes. The GST portal at gst.gov.in charges nothing to file GSTR-1 or GSTR-3B, and nil returns can also be filed by SMS to 14409. What you pay for with software, a CA or a managed service is the time spent preparing data, reconciling input tax credit and avoiding errors, not the filing itself.

Are GST filing fees tax-deductible for my business?

Yes. Fees paid to a CA, accountant or compliance service and GST software subscriptions are business expenses, deductible under Section 37(1) of the Income-tax Act, 1961 for FY 2025-26. If you are GST-registered, the 18% GST charged on the professional fee can usually be claimed as input tax credit.

What is usually not included in a monthly GST filing fee?

Many quotes cover only GSTR-1 and GSTR-3B. Items often charged extra are GSTR-2B reconciliation, the annual GSTR-9 return, amendments to past returns, filing of missed earlier months, and replies to GST notices. Ask for the scope in writing before you compare prices, so you know what each quote actually covers.

What does a late GST return cost a small business?

A late GSTR-3B attracts a late fee of Rs 50 per day, or Rs 20 per day for a nil return, capped based on turnover, plus interest at 18% per annum on tax paid late. A few months of missed returns can cost more than a year of professional fees, which is why the lowest-price option is not always the lowest total cost.

Does GST filing cost more if my business has more than one GSTIN?

Usually, yes. Each GSTIN, meaning each state registration, files its own GSTR-1, GSTR-3B and GSTR-9, so the work grows with every registration. Check whether a quote is per GSTIN or covers all your registrations, and how invoice volume in each state affects the price.

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